You don't have javascript enabled. The web-server may behave improperly.

Slow processing: Our main compute server is being reinstalled. You can still submit jobs, but they run one at a time on a backup server and can take hours or days. Results appear on the result page (and by email, if you gave one) when done.

New query
Download
Reference
News
Server status
Example results
Help

Your recent jobs:

Queued    0
Running    0
Finished   0
Failed    0




© Nanjiang Shu

SciLifeLab Logotype Stockholm University logotype

Frag1D: prediction of shape strings and secondary structure of proteins

Please paste your amino acid sequences in FASTA format (max 100000 chars)
Allowed characters: "ABCDEFGHIKLMNPQRSTUVWYZX*", of which "BUZ*" will be converted to 'X'
(Max allowd number of sequences is . Sequences should be no shorter than 10 amino acids)

Force run (do not use cached results):

      


Reference

Frag1D: [Please cite this paper if you find PredZinc useful in your research]

Tuping Zhou*, Nanjiang Shu* and Sven Hovmöller. A Novel Method for Accurate One-dimensional Protein Structure Prediction based on Fragment Matching, Bioinformatics, 2010;26(4):470-477. (*Co-first author) [PubMed]